BEAGLE
An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
Public Attributes | List of all members
BeagleOperationByPartition Struct Reference

A list of integer indices which specify a partial likelihoods operation for a partitioned analysis. More...

#include <beagle.h>

Public Attributes

int destinationPartials
 
int destinationScaleWrite
 
int destinationScaleRead
 
int child1Partials
 
int child1TransitionMatrix
 
int child2Partials
 
int child2TransitionMatrix
 
int partition
 
int cumulativeScaleIndex
 

Detailed Description

A list of integer indices which specify a partial likelihoods operation for a partitioned analysis.

Member Data Documentation

◆ child1Partials

int BeagleOperationByPartition::child1Partials

index of first child partials buffer

◆ child1TransitionMatrix

int BeagleOperationByPartition::child1TransitionMatrix

index of transition matrix of first partials child buffer

◆ child2Partials

int BeagleOperationByPartition::child2Partials

index of second child partials buffer

◆ child2TransitionMatrix

int BeagleOperationByPartition::child2TransitionMatrix

index of transition matrix of second partials child buffer

◆ cumulativeScaleIndex

int BeagleOperationByPartition::cumulativeScaleIndex

index number of scaleBuffer to store accumulated factors

◆ destinationPartials

int BeagleOperationByPartition::destinationPartials

index of destination, or parent, partials buffer

◆ destinationScaleRead

int BeagleOperationByPartition::destinationScaleRead

index of scaling buffer to read from (if set to BEAGLE_OP_NONE then use of existing scale factors is disabled)

◆ destinationScaleWrite

int BeagleOperationByPartition::destinationScaleWrite

index of scaling buffer to write to (if set to BEAGLE_OP_NONE then calculation of new scalers is disabled)

◆ partition

int BeagleOperationByPartition::partition

index of partition


The documentation for this struct was generated from the following file: